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» On the Evolution of Evolutionary Algorithms
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ESA
2008
Springer
106views Algorithms» more  ESA 2008»
15 years 8 months ago
An Experimental Analysis of Robinson-Foulds Distance Matrix Algorithms
In this paper, we study two fast algorithms--HashRF and PGM-Hashed--for computing the Robinson-Foulds (RF) distance matrix between a collection of evolutionary trees. The RF distan...
Seung-Jin Sul, Tiffani L. Williams
ROBOCUP
2004
Springer
114views Robotics» more  ROBOCUP 2004»
15 years 12 months ago
Evolutionary Gait-Optimization Using a Fitness Function Based on Proprioception
Abstract. This paper presents a new approach to optimize gait parameter sets using evolutionary algorithms. It separates the crossover-step of the evolutionary algorithm into an in...
Thomas Röfer
GECCO
2006
Springer
127views Optimization» more  GECCO 2006»
15 years 10 months ago
Multiobjective genetic algorithms for multiscaling excited state direct dynamics in photochemistry
This paper studies the effectiveness of multiobjective genetic and evolutionary algorithms in multiscaling excited state direct dynamics in photochemistry via rapid reparameteriza...
Kumara Sastry, D. D. Johnson, Alexis L. Thompson, ...
BIOINFORMATICS
2002
100views more  BIOINFORMATICS 2002»
15 years 6 months ago
Optimal algorithms for local vertex quartet cleaning
Reconstructing evolutionary trees is an important problem in biology. A response to the computational intractability of most of the traditional criteria for inferring evolutionary...
Gianluca Della Vedova, Todd Wareham
BMCBI
2010
132views more  BMCBI 2010»
15 years 6 months ago
dConsensus: a tool for displaying domain assignments by multiple structure-based algorithms and for construction of a consensus
Background: Partitioning of a protein into structural components, known as domains, is an important initial step in protein classification and for functional and evolutionary stud...
Kieran Alden, Stella Veretnik, Philip E. Bourne