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JCB
2008
106views more  JCB 2008»
15 years 6 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
CPHYSICS
2007
222views more  CPHYSICS 2007»
15 years 6 months ago
JADAMILU: a software code for computing selected eigenvalues of large sparse symmetric matrices
A new software code for computing selected eigenvalues and associated eigenvectors of a real symmetric matrix is described. The eigenvalues are either the smallest or those closes...
Matthias Bollhöfer, Yvan Notay
EOR
2007
101views more  EOR 2007»
15 years 6 months ago
Optimizing an objective function under a bivariate probability model
The motivation of this paper is to obtain an analytical closed form of a quadratic objective function arising from a stochastic decision process with bivariate exponential probabi...
Xavier Brusset, Nico M. Temme
JUCS
2006
117views more  JUCS 2006»
15 years 6 months ago
Resource Efficient Maintenance of Wireless Network Topologies
Abstract: Multiple hop routing in mobile ad hoc networks can minimize energy consumption and increase data throughput. Yet, the problem of radio interferences remain. However if th...
Tamás Lukovszki, Christian Schindelhauer, K...
SIAMSC
2008
129views more  SIAMSC 2008»
15 years 6 months ago
Bottom-Up Construction and 2: 1 Balance Refinement of Linear Octrees in Parallel
Abstract. In this article, we propose new parallel algorithms for the construction and 2:1 balance refinement of large linear octrees on distributed memory machines. Such octrees a...
Hari Sundar, Rahul S. Sampath, George Biros