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» On the Complexity of Real Functions
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192
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BMCBI
2006
87views more  BMCBI 2006»
15 years 7 months ago
Computational expression deconvolution in a complex mammalian organ
Background: Microarray expression profiling has been widely used to identify differentially expressed genes in complex cellular systems. However, while such methods can be used to...
Min Wang, Stephen R. Master, Lewis A. Chodosh
192
Voted
BMCBI
2007
122views more  BMCBI 2007»
15 years 6 months ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
159
Voted
CORR
2007
Springer
110views Education» more  CORR 2007»
15 years 6 months ago
Graph Annotations in Modeling Complex Network Topologies
abstract such additional information as network annotations. We introduce a network topology modeling framework that treats annotations as an extended correlation profile of a net...
Xenofontas A. Dimitropoulos, Dmitri V. Krioukov, A...
187
Voted
BMCBI
2004
196views more  BMCBI 2004»
15 years 6 months ago
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...
Robert C. Edgar
226
Voted
FSTTCS
2010
Springer
15 years 4 months ago
The effect of girth on the kernelization complexity of Connected Dominating Set
In the Connected Dominating Set problem we are given as input a graph G and a positive integer k, and are asked if there is a set S of at most k vertices of G such that S is a dom...
Neeldhara Misra, Geevarghese Philip, Venkatesh Ram...