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» On the Complexity of Positional Sequencing by Hybridization
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AAAI
2007
15 years 8 months ago
A Randomized String Kernel and Its Application to RNA Interference
String kernels directly model sequence similarities without the necessity of extracting numerical features in a vector space. Since they better capture complex traits in the seque...
Shibin Qiu, Terran Lane, Ljubomir J. Buturovic
BMCBI
2007
96views more  BMCBI 2007»
15 years 6 months ago
Features generated for computational splice-site prediction correspond to functional elements
Background: Accurate selection of splice sites during the splicing of precursors to messenger RNA requires both relatively well-characterized signals at the splice sites and auxil...
Rezarta Islamaj Dogan, Lise Getoor, W. John Wilbur...
CORR
1999
Springer
164views Education» more  CORR 1999»
15 years 5 months ago
Annotation graphs as a framework for multidimensional linguistic data analysis
In recent work we have presented a formal framework for linguistic annotation based on labeled acyclic digraphs. These `annotation graphs' oer a simple yet powerful method fo...
Steven Bird, Mark Liberman
173
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WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
16 years 20 days ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
ICCS
2005
Springer
15 years 11 months ago
Simulation and Visualization of Air Flow Around Bat Wings During Flight
This paper presents a case study of interdisciplinary collaboration in building a set of tools to simulate and visualize airflow around bat wings during flight. A motion capture sy...
Igor Pivkin, Eduardo Hueso, R. Weinstein, David H....