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BMCBI
2006
110views more  BMCBI 2006»
15 years 6 months ago
Design of a combinatorial DNA microarray for protein-DNA interaction studies
Background: Discovery of precise specificity of transcription factors is an important step on the way to understanding the complex mechanisms of gene regulation in eukaryotes. Rec...
Julian Mintseris, Michael B. Eisen
DAM
2007
177views more  DAM 2007»
15 years 6 months ago
On Khachiyan's algorithm for the computation of minimum-volume enclosing ellipsoids
Given A := {a1, . . . , am} ⊂ Rd whose affine hull is Rd, we study the problems of computing an approximate rounding of the convex hull of A and an approximation to the minimum ...
Michael J. Todd, E. Alper Yildirim
JCB
2006
107views more  JCB 2006»
15 years 6 months ago
Protein Image Alignment via Piecewise Affine Transformations
Abstract We present a new approach for aligning families of 2D gels. Instead of choosing one of the gels as reference and performing pairwise alignment, we construct an ideal gel t...
Florian A. Potra, Xing Liu, Françoise Seill...
NJC
2006
125views more  NJC 2006»
15 years 6 months ago
PRO: A Model for the Design and Analysis of Efficient and Scalable Parallel Algorithms
Abstract. We present a new parallel computation model called the Parallel ResourceOptimal computation model. PRO is a framework being proposed to enable the design of efficient and...
Assefaw Hadish Gebremedhin, Mohamed Essaïdi, ...
IPL
2007
72views more  IPL 2007»
15 years 6 months ago
How to safely close a discussion
In the secure communication problem, we focus on safe termination. In applications such as electronic transactions, we want each party to be ensured that both sides agree on the s...
Gildas Avoine, Serge Vaudenay