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» On the Complexity of Exclusion Algorithms for Optimization
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TPDS
2008
140views more  TPDS 2008»
15 years 6 months ago
High-Performance Resource Allocation and Request Redirection Algorithms for Web Clusters
Abstract-- With increasing richness in features such as personalization of content, web applications are becoming more complex and hence compute intensive. Traditional approaches t...
Supranamaya Ranjan, Edward W. Knightly
BMCBI
2008
105views more  BMCBI 2008»
15 years 6 months ago
A gene pattern mining algorithm using interchangeable gene sets for prokaryotes
Background: Mining gene patterns that are common to multiple genomes is an important biological problem, which can lead us to novel biological insights. When family classification...
Meng Hu, Kwangmin Choi, Wei Su, Sun Kim, Jiong Yan...
BMCBI
2010
185views more  BMCBI 2010»
15 years 1 months ago
MetaPIGA v2.0: maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heu
Background: The development, in the last decade, of stochastic heuristics implemented in robust application softwares has made large phylogeny inference a key step in most compara...
Raphaël Helaers, Michel C. Milinkovitch
CADE
2005
Springer
16 years 7 months ago
An Algorithm for Deciding BAPA: Boolean Algebra with Presburger Arithmetic
We describe an algorithm for deciding the first-order multisorted theory BAPA, which combines 1) Boolean algebras of sets of uninterpreted elements (BA) and 2) Presburger arithmeti...
Viktor Kuncak, Huu Hai Nguyen, Martin C. Rinard
RECOMB
2005
Springer
16 years 7 months ago
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences
Abstract. In order to guarantee that the optimal motif is found, traditional pattern-driven approaches perform an exhaustive search over all candidate motifs of length l. We develo...
Sing-Hoi Sze, Xiaoyan Zhao