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IPPS
2003
IEEE
16 years 28 days ago
Sequence Alignment on the Cray MTA-2
The standard algorithm for alignment of DNA sequences using dynamic programming has been implemented on the Cray MTA-2 (Multithreaded Architecture-2) at ENRI (Electronic Navigatio...
Shahid H. Bokhari, Jon R. Sauer
IPPS
2003
IEEE
16 years 28 days ago
Remote and Partial Reconfiguration of FPGAs: Tools and Trends
This work describes the implementation of digital reconfigurable systems (DRS) using commercial FPGA devices. This paper has three main goals. The first one is to present the tren...
Daniel Mesquita, Fernando Gehm Moraes, José...
IPPS
2003
IEEE
16 years 28 days ago
Parallel Detection of Regulatory Elements with gMP
The detection of regulatory elements from a large set of regulatory regions is a challenging problem in computational genomics. However, computational methods to extract this biol...
Bertil Schmidt, Lin Feng, Amey V. Laud, Yusdi Sant...
ITC
2003
IEEE
105views Hardware» more  ITC 2003»
16 years 28 days ago
IEEE 1149.6 - A Practical Perspective
The IEEE 1149.6 standard was approved in March of 2003. The standard extends the capability of the IEEE 1149.1 standard to include AC-coupled and/or differential nets. These nets ...
Bill Eklow, Carl Barnhart, Mike Ricchetti, Terry B...
LICS
2003
IEEE
16 years 28 days ago
Revisiting Digitization, Robustness, and Decidability for Timed Automata
We consider several questions related to the use of digitization techniques for timed automata. These very successful techniques reduce dense-time language inclusion problems to d...
Joël Ouaknine, James Worrell