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TCBB
2008
126views more  TCBB 2008»
15 years 6 months ago
Graphical Models of Residue Coupling in Protein Families
Abstract-- Many statistical measures and algorithmic techniques have been proposed for studying residue coupling in protein families. Generally speaking, two residue positions are ...
John Thomas, Naren Ramakrishnan, Chris Bailey-Kell...
IPM
2007
85views more  IPM 2007»
15 years 6 months ago
A retrospective study of a hybrid document-context based retrieval model
This paper describes our novel retrieval model that is based on contexts of query terms in documents (i.e., document contexts). Our model is novel because it explicitly takes into...
Ho Chung Wu, Robert W. P. Luk, Kam-Fai Wong, K. L....
BMCBI
2005
77views more  BMCBI 2005»
15 years 6 months ago
Ontological visualization of protein-protein interactions
Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
Harold J. Drabkin, Christopher Hollenbeck, David P...
BMCBI
2005
100views more  BMCBI 2005»
15 years 6 months ago
EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments
Background: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold ...
Jean-Christophe Gelly, Laurent Chiche, Jér&...
BMCBI
2005
101views more  BMCBI 2005»
15 years 6 months ago
TmaDB: a repository for tissue microarray data
Background: Tissue microarray (TMA) technology has been developed to facilitate large, genome-scale molecular pathology studies. This technique provides a high-throughput method f...
Archana Sharma-Oates, Philip Quirke, David R. West...
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