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» On Timed Models of Gene Networks
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NAR
2008
191views more  NAR 2008»
15 years 6 months ago
The BioGRID Interaction Database: 2008 update
The Biological General Repository for Interaction Datasets (BioGRID) database (http://www. thebiogrid.org) was developed to house and distribute collections of protein and genetic...
Bobby-Joe Breitkreutz, Chris Stark, Teresa Reguly,...
NAR
2006
177views more  NAR 2006»
15 years 6 months ago
PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways
The PUMA2 system (available at http://compbio.mcs. 10 anl.gov/puma2) is an interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and met...
Natalia Maltsev, Elizabeth M. Glass, Dinanath Sula...
COCOA
2009
Springer
15 years 9 months ago
An Effective Hybrid Algorithm for the Circles and Spheres Packing Problems
stract to be announcedPlenary session 09:00-10:00 Panos M, Pardalos, University of Florida, USA Tea Break 10:00-10:20 At the 1st floor 10:20-10:45 Polynomial Approximation Schemes ...
Jingfa Liu, Yonglei Yao, Yu Zheng, Huantong Geng, ...
IPPS
2009
IEEE
16 years 1 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
BICOB
2009
Springer
16 years 1 months ago
Assembly of Large Genomes from Paired Short Reads
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...
Benjamin G. Jackson, Patrick S. Schnable, Srinivas...