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» On Timed Models of Gene Networks
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TCBB
2008
103views more  TCBB 2008»
15 years 6 months ago
DNA Motif Representation with Nucleotide Dependency
The problem of discovering novel motifs of binding sites is important to the understanding of gene regulatory networks. Motifs are generally represented by matrices (PWM or PSSM) o...
Francis Y. L. Chin, Henry C. M. Leung
NAR
2000
70views more  NAR 2000»
15 years 6 months ago
UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics
The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we...
Jo L. Dicks, Mary Anderson, Linda Cardle, Sam Cart...
TEC
2002
117views more  TEC 2002»
15 years 6 months ago
A genetic algorithm for shortest path routing problem and the sizing of populations
This paper presents a genetic algorithmic approach to the shortest path (SP) routing problem. Variable-length chromosomes (strings) and their genes (parameters) have been used for ...
Chang Wook Ahn, Rudrapatna S. Ramakrishna
CDC
2010
IEEE
144views Control Systems» more  CDC 2010»
15 years 1 months ago
Formal analysis of piecewise affine systems through formula-guided refinement
Abstract-- We present a computational framework for identifying a set of initial states from which all trajectories of a piecewise affine (PWA) system satisfy a Linear Temporal Log...
Boyan Yordanov, Jana Tumova, Calin Belta, Ivana Ce...
HYBRID
2004
Springer
16 years 1 days ago
Understanding the Bacterial Stringent Response Using Reachability Analysis of Hybrid Systems
Abstract. In this paper we model coupled genetic and metabolic networks as hybrid systems. The vector fields are multi - affine, i.e., have only product - type nonlinearities to a...
Calin Belta, Peter Finin, Luc C. G. J. M. Habets, ...