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ISMB
2004
15 years 7 months ago
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data
Motivation: Sigma factors regulate the expression of genes in Bacillus subtilis at the transcriptional level. First we assess the ability of currently available gene regulatory ne...
Michiel J. L. de Hoon, Yuko Makita, Seiya Imoto, K...
DLOG
2003
15 years 7 months ago
Wine Agent: Semantic Web Testbed Application
The Wine Agent is a demonstration system that uses an underlying domain ontology to provide suitable wines for a given meal. In doing so it serves as a testbed, not only for the l...
Eric I. Hsu, Deborah L. McGuinness
ISMB
2004
15 years 7 months ago
Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy
Motivation: Non-coding RNAs (ncRNAs)--functional RNA molecules not coding for proteins--are grouped into hundreds of families of homologs. To find new members of an ncRNA gene fam...
Zasha Weinberg, Walter L. Ruzzo
ESANN
2003
15 years 7 months ago
Approximately unbiased estimation of conditional variance in heteroscedastic kernel ridge regression
In this paper we extend a form of kernel ridge regression for data characterised by a heteroscedastic noise process (introduced in Foxall et al. [1]) in order to provide approxima...
Gavin C. Cawley, Nicola L. C. Talbot, Robert J. Fo...
SDM
2004
SIAM
187views Data Mining» more  SDM 2004»
15 years 7 months ago
Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
Microarray experiments have been extensively used for simultaneously measuring DNA expression levels of thousands of genes in genome research. A key step in the analysis of gene e...
Hyuk Cho, Inderjit S. Dhillon, Yuqiang Guan, Suvri...
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