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CSB
2004
IEEE
149views Bioinformatics» more  CSB 2004»
15 years 10 months ago
Weighting Features to Recognize 3D Patterns of Electron Density in X-Ray Protein Crystallography
Feature selection and weighting are central problems in pattern recognition and instance-based learning. In this work, we discuss the challenges of constructing and weighting feat...
Kreshna Gopal, Tod D. Romo, James C. Sacchettini, ...
CSB
2004
IEEE
110views Bioinformatics» more  CSB 2004»
15 years 10 months ago
SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error
For the identification of novel proteins using MS/MS, de novo sequencing software computes one or several possible amino acid sequences (called sequence tags) for each MS/MS spect...
Yonghua Han, Bin Ma, Kaizhong Zhang
STRINGOLOGY
2004
15 years 8 months ago
BDD-Based Analysis of Gapped q-Gram Filters
Recently, there has been a surge of interest in gapped q-gram filters for approximate string matching. Important design parameters for filters are for example the value of q, the f...
Marc Fontaine, Stefan Burkhardt, Juha Kärkk&a...
TCBB
2008
126views more  TCBB 2008»
15 years 6 months ago
Combinatorial Approaches for Mass Spectra Recalibration
Mass spectrometry has become one of the most popular analysis techniques in Proteomics and Systems Biology. With the creation of larger data sets, the automated recalibration of ma...
Sebastian Böcker, Veli Mäkinen
TKDE
2008
108views more  TKDE 2008»
15 years 6 months ago
Grid Service Discovery with Rough Sets
The computational grid is rapidly evolving into a service-oriented computing infrastructure that facilitates resource sharing and large-scale problem solving over the Internet. Ser...
Maozhen Li, Bin Yu, Omer F. Rana, Zidong Wang