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BMCBI
2006
139views more  BMCBI 2006»
15 years 7 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
CPHYSICS
2006
103views more  CPHYSICS 2006»
15 years 7 months ago
WATERWAVES: wave particles dynamics on a complex triatomic potential
The WATERWAVES program suite performs complex scattering calculations by propagating a wave packet in a complex, full-dimensional potential for non-rotating (J = 0) but vibrating ...
Simone Taioli, Jonathan Tennyson
BMCBI
2007
133views more  BMCBI 2007»
15 years 7 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
IPM
2008
141views more  IPM 2008»
15 years 7 months ago
Towards a unified approach to document similarity search using manifold-ranking of blocks
Document similarity search (i.e. query by example) aims to retrieve a ranked list of documents similar to a query document in a text corpus or on the Web. Most existing approaches...
Xiaojun Wan, Jianwu Yang, Jianguo Xiao
JMLR
2008
230views more  JMLR 2008»
15 years 7 months ago
Exponentiated Gradient Algorithms for Conditional Random Fields and Max-Margin Markov Networks
Log-linear and maximum-margin models are two commonly-used methods in supervised machine learning, and are frequently used in structured prediction problems. Efficient learning of...
Michael Collins, Amir Globerson, Terry Koo, Xavier...
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