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ICPP
2009
IEEE
16 years 1 months ago
Fine-grain Parallelism Using Multi-core, Cell/BE, and GPU Systems: Accelerating the Phylogenetic Likelihood Function
We are currently faced with the situation where applications have increasing computational demands and there is a wide selection of parallel processor systems. In this paper we fo...
Frederico Pratas, Pedro Trancoso, Alexandros Stama...
ICPP
2009
IEEE
16 years 1 months ago
Integrated Performance Views in Charm++: Projections Meets TAU
Abstract—The Charm++ parallel programming system provides a modular performance interface that can be used to extend its performance measurement and analysis capabilities. The in...
Scott Biersdorff, Chee Wai Lee, Allen D. Malony, L...
ICPP
2009
IEEE
16 years 1 months ago
CIFTS: A Coordinated Infrastructure for Fault-Tolerant Systems
—Considerable work has been done on providing fault tolerance capabilities for different software components on largescale high-end computing systems. Thus far, however, these fa...
Rinku Gupta, Pete Beckman, Byung-Hoon Park, Ewing ...
IPPS
2009
IEEE
16 years 1 months ago
Evaluating the use of GPUs in liver image segmentation and HMMER database searches
In this paper we present the results of parallelizing two life sciences applications, Markov random fieldsbased (MRF) liver segmentation and HMMER’s Viterbi algorithm, using GP...
John Paul Walters, Vidyananth Balu, Suryaprakash K...
IPPS
2009
IEEE
16 years 1 months ago
Designing multi-leader-based Allgather algorithms for multi-core clusters
The increasing demand for computational cycles is being met by the use of multi-core processors. Having large number of cores per node necessitates multi-core aware designs to ext...
Krishna Chaitanya Kandalla, Hari Subramoni, Gopala...