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RECOMB
2005
Springer
16 years 6 months ago
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
Tommy Kaplan, Nir Friedman, Hanah Margalit
RECOMB
2004
Springer
16 years 6 months ago
Learning Regulatory Network Models that Represent Regulator States and Roles
Abstract. We present an approach to inferring probabilistic models of generegulatory networks that is intended to provide a more mechanistic representation of transcriptional regul...
Keith Noto, Mark Craven
RECOMB
2003
Springer
16 years 6 months ago
Transforming men into mice: the Nadeau-Taylor chromosomal breakage model revisited
Although analysis of genome rearrangements was pioneered by Dobzhansky and Sturtevant 65 years ago, we still know very little about the rearrangement events that produced the exis...
Pavel A. Pevzner, Glenn Tesler
VLDB
2005
ACM
123views Database» more  VLDB 2005»
16 years 6 months ago
Querying XML streams
Efficient querying of XML streams will be one of the fundamental features of next-generation information systems. In this paper we propose the TurboXPath path processor, which acce...
Vanja Josifovski, Marcus Fontoura, Attila Barta
SIGMOD
2008
ACM
122views Database» more  SIGMOD 2008»
16 years 6 months ago
Building query optimizers for information extraction: the SQoUT project
Text documents often embed data that is structured in nature. This structured data is increasingly exposed using information extraction systems, which generate structured relation...
Alpa Jain, Panagiotis G. Ipeirotis, Luis Gravano