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CIKM
2008
Springer
15 years 8 months ago
SNIF TOOL: sniffing for patterns in continuous streams
Continuous time-series sequence matching, specifically, matching a numeric live stream against a set of predefined pattern sequences, is critical for domains ranging from fire spr...
Abhishek Mukherji, Elke A. Rundensteiner, David C....
SDM
2008
SIAM
161views Data Mining» more  SDM 2008»
15 years 8 months ago
Efficient Maximum Margin Clustering via Cutting Plane Algorithm
Maximum margin clustering (MMC) is a recently proposed clustering method, which extends the theory of support vector machine to the unsupervised scenario and aims at finding the m...
Bin Zhao, Fei Wang, Changshui Zhang
BMCBI
2010
172views more  BMCBI 2010»
15 years 6 months ago
Accessing the SEED genome databases via Web services API: tools for programmers
Background: The SEED integrates many publicly available genome sequences into a single resource. The database contains accurate and up-to-date annotations based on the subsystems ...
Terry Disz, Sajia Akhter, Daniel Cuevas, Robert Ol...
BMCBI
2010
136views more  BMCBI 2010»
15 years 6 months ago
Bias correction and Bayesian analysis of aggregate counts in SAGE libraries
Background: Tag-based techniques, such as SAGE, are commonly used to sample the mRNA pool of an organism's transcriptome. Incomplete digestion during the tag formation proces...
Russell L. Zaretzki, Michael A. Gilchrist, William...
BMCBI
2008
130views more  BMCBI 2008»
15 years 6 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...