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RECOMB
2006
Springer
16 years 7 months ago
Alignment Statistics for Long-Range Correlated Genomic Sequences
It is well known that the base composition along eukaryotic genomes is long-range correlated. Here, we investigate the effect of such long-range correlations on alignment score sta...
Philipp W. Messer, Ralf Bundschuh, Martin Vingron,...
RECOMB
2004
Springer
16 years 7 months ago
Multiple organism gene finding by collapsed gibbs sampling
The Gibbs sampling method has been widely used for sequence analysis after it was successfully applied to the problem of identifying regulatory motif sequences upstream of genes. ...
Sourav Chatterji, Lior Pachter
DCC
2006
IEEE
16 years 6 months ago
Roux-type constructions for covering arrays of strengths three and four
A covering array CA(N; t, k, v) is an N ? k array such that every N ? t sub-array contains all t-tuples from v symbols at least once, where t is the strength of the array. Coverin...
Charles J. Colbourn, Sosina Martirosyan, Tran van ...
DCC
2006
IEEE
16 years 6 months ago
On Efficient Quantizer Design for Robust Distributed Source Coding
This paper considers the design of efficient quantizers for a distributed source coding system. The information is encoded at independent terminals and transmitted across separate...
Ankur Saxena, Jayanth Nayak, Kenneth Rose
STACS
2010
Springer
16 years 1 months ago
The Recognition of Tolerance and Bounded Tolerance Graphs
Tolerance graphs model interval relations in such a way that intervals can tolerate a certain degree of overlap without being in conflict. This subclass of perfect graphs has bee...
George B. Mertzios, Ignasi Sau, Shmuel Zaks