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182
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ISMB
2000
15 years 8 months ago
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
208
Voted
SIGCOMM
2010
ACM
15 years 7 months ago
Detecting the performance impact of upgrades in large operational networks
Networks continue to change to support new applications, improve reliability and performance and reduce the operational cost. The changes are made to the network in the form of up...
Ajay Anil Mahimkar, Han Hee Song, Zihui Ge, Aman S...
176
Voted
BMCBI
2010
153views more  BMCBI 2010»
15 years 7 months ago
PPLook: an automated data mining tool for protein-protein interaction
Background: Extracting and visualizing of protein-protein interaction (PPI) from text literatures are a meaningful topic in protein science. It assists the identification of inter...
Shao-Wu Zhang, Yao-Jun Li, Li Xia, Quan Pan
BMCBI
2010
101views more  BMCBI 2010»
15 years 7 months ago
Comparative analysis of thermophilic and mesophilic proteins using Protein Energy Networks
Background: Thermophilic proteins sustain themselves and function at higher temperatures. Despite their structural and functional similarities with their mesophilic homologues, th...
M. S. Vijayabaskar, Saraswathi Vishveshwara
157
Voted
BMCBI
2007
97views more  BMCBI 2007»
15 years 7 months ago
SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets
Background: Array comparative genome hybridization (aCGH) provides information about genomic aberrations. Alterations in the DNA copy number may cause the cell to malfunction, lea...
Carmen Lai, Hugo M. Horlings, Marc J. van de Vijve...