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BMCBI
2005
124views more  BMCBI 2005»
15 years 6 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
BMCBI
2008
149views more  BMCBI 2008»
15 years 5 months ago
MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data
Background: Recent advances in global genomic profiling methodologies have enabled multidimensional characterization of biological systems. Complete analysis of these genomic prof...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Raym...
SIGSOFT
2003
ACM
16 years 7 months ago
Towards scalable compositional analysis by refactoring design models
Automated finite-state verification techniques have matured considerably in the past several years, but state-space explosion remains an obstacle to their use. Theoretical lower b...
Yung-Pin Cheng, Michal Young, Che-Ling Huang, Chia...
RECOMB
2002
Springer
16 years 7 months ago
Phase-independent rhythmic analysis of genome-wide expression patterns
We introduce a model-based analysis technique for extracting and characterizing rhythmic expression pro les from genome-wide DNA microarray hybridization data. These patterns are ...
Christopher James Langmead, Anthony K. Yan, C. Rob...
CODES
2008
IEEE
16 years 1 months ago
Static analysis of processor stall cycle aggregation
Processor Idle Cycle Aggregation (PICA) is a promising approach for low power execution of processors, in which small memory stalls are aggregated to create a large one, and the p...
Jongeun Lee, Aviral Shrivastava