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RECOMB
2008
Springer
16 years 7 months ago
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins
Abstract. In engineering protein variants by constructing and screening combinatorial libraries of chimeric proteins, two complementary and competing goals are desired: the new pro...
Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg
DAC
2004
ACM
16 years 7 months ago
A SAT-based algorithm for reparameterization in symbolic simulation
Parametric representations used for symbolic simulation of circuits usually use BDDs. After a few steps of symbolic simulation, state set representation is converted from one para...
Pankaj Chauhan, Edmund M. Clarke, Daniel Kroening
ECAI
2010
Springer
15 years 7 months ago
Optimal Task Migration in Service-Oriented Systems: Algorithms and Mechanisms
In service-oriented systems, such as grids and clouds, users are able to outsource complex computational tasks by procuring resources on demand from remote service providers. As th...
Sebastian Stein, Enrico Gerding, Nicholas R. Jenni...
BMCBI
2010
139views more  BMCBI 2010»
15 years 6 months ago
A global optimization algorithm for protein surface alignment
Background: A relevant problem in drug design is the comparison and recognition of protein binding sites. Binding sites recognition is generally based on geometry often combined w...
Paola Bertolazzi, Concettina Guerra, Giampaolo Liu...
DAC
2010
ACM
15 years 10 months ago
Scalable specification mining for verification and diagnosis
Effective system verification requires good specifications. The lack of sufficient specifications can lead to misses of critical bugs, design re-spins, and time-to-market slips. I...
Wenchao Li, Alessandro Forin, Sanjit A. Seshia