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BIOSYSTEMS
2008
130views more  BIOSYSTEMS 2008»
15 years 6 months ago
Biological networks in metabolic P systems
The metabolic P algorithm is a procedure which determines, in a biochemically realistic way, the evolution of P systems representing biological phenomena. A new formulation of thi...
Vincenzo Manca, Luca Bianco
FOIS
2006
15 years 7 months ago
What is a Biological Function?
This paper examines the concepts biological function (BF) and functioning as they are used in recent work on formal ontology and its applications in the biomedical domain. My purpo...
Patricia Diaz-Herrera
IDA
2005
Springer
15 years 11 months ago
Biological Cluster Validity Indices Based on the Gene Ontology
With the invention of biotechnological high throughput methods like DNA microarrays and the analysis of the resulting huge amounts of biological data, clustering algorithms gain ne...
Nora Speer, Christian Spieth, Andreas Zell
SIGMOD
2004
ACM
157views Database» more  SIGMOD 2004»
16 years 6 months ago
BIO-AJAX: An Extensible Framework for Biological Data Cleaning
As databases become more pervasive through the biological sciences, various data quality issues regarding data legacy, data uniformity and data duplication arise. Due to the natur...
Katherine G. Herbert, Narain H. Gehani, William H....
ICCS
2004
Springer
15 years 11 months ago
Improved Sampling for Biological Molecules Using Shadow Hybrid Monte Carlo
Shadow Hybrid Monte Carlo (SHMC) is a new method for sampling the phase space of large biological molecules. It improves sampling by allowing larger time steps and system sizes in ...
Scott S. Hampton, Jesús A. Izaguirre