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IC3
2009
15 years 4 months ago
IDChase: Mitigating Identifier Migration Trap in Biological Databases
A convenient mechanism to refer to large biological objects such as sequences, structures and networks is the use of identifiers or handles, commonly called IDs. IDs function as a ...
Anupam Bhattacharjee, Aminul Islam, Hasan M. Jamil...
ISMB
1996
15 years 7 months ago
A Grammar-Based Unification of Several Alignment and Folding Algorithms
Weshowin this paper that manypopular models of folding and/or alignment maybe described by a new formalism: multi-tape S-attribute grammars(MTSAG's).This formalism relieves t...
Fabrice Lefebvre
BMCBI
2007
156views more  BMCBI 2007»
15 years 6 months ago
Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data
Background: Evolutionary analysis provides a formal framework for comparative analysis of genomic and other data. In evolutionary analysis, observed data are treated as the termin...
Thomas Hladish, Vivek Gopalan, Chengzhi Liang, Wei...
BMCBI
2011
15 years 1 months ago
easyDAS: Automatic creation of DAS servers
Background: The Distributed Annotation System (DAS) has proven to be a successful way to publish and share biological data. Although there are more than 750 active registered serv...
Bernat Gel, Andrew M. Jenkinson, Rafael C. Jimenez...
EPS
1995
Springer
15 years 10 months ago
Evolving the Architecture of a Multi-part Program in Genetic Programming Using Architecture-Altering Operations
: This paper describes six new architecture-altering operations that provide a way to dynamically determine the architecture of a multipart program during a run of genetic programm...
John R. Koza