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DAM
2010
112views more  DAM 2010»
15 years 6 months ago
New results on optimizing rooted triplets consistency
Abstract. A set of phylogenetic trees with overlapping leaf sets is consistent if it can be merged without conflicts into a supertree. In this paper, we study the polynomial-time a...
Jaroslaw Byrka, Sylvain Guillemot, Jesper Jansson
BMCBI
2006
111views more  BMCBI 2006»
15 years 6 months ago
PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
Tomer Hertz, Chen Yanover
CORR
2011
Springer
222views Education» more  CORR 2011»
14 years 10 months ago
A New Data Layout For Set Intersection on GPUs
Abstract—Set intersection is the core in a variety of problems, e.g. frequent itemset mining and sparse boolean matrix multiplication. It is well-known that large speed gains can...
Rasmus Resen Amossen, Rasmus Pagh
ICIP
2008
IEEE
16 years 29 days ago
An iterative algorithm for linear inverse problems with compound regularizers
In several imaging inverse problems, it may be of interest to encourage the solution to have characteristics which are most naturally expressed by the combination of more than one...
José M. Bioucas-Dias, Mário A. T. Fi...
AIPS
2007
15 years 8 months ago
On the Hardness of Planning Problems with Simple Causal Graphs
We present three new complexity results for classes of planning problems with simple causal graphs. First, we describe a polynomial time algorithm that uses macros to generate pla...
Omer Giménez, Anders Jonsson