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» New Approaches to Compare Phylogenetic Search Heuristics
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EVOW
2010
Springer
16 years 23 days ago
A Local Search Appproach for Transmembrane Segment and Signal Peptide Discrimination
Discriminating between secreted and membrane proteins is a challenging task. This is particularly true for discriminating between transmembrane segments and signal peptides because...
Sami Laroum, Dominique Tessier, Béatrice Du...
PPSN
2004
Springer
15 years 11 months ago
An Evolutionary Algorithm for the Maximum Weight Trace Formulation of the Multiple Sequence Alignment Problem
Abstract. The multiple sequence alignment problem (MSA) can be reformulated as the problem of finding a maximum weight trace in an alignment graph, which is derived from all pairw...
Gabriele Koller, Günther R. Raidl
COR
2010
177views more  COR 2010»
15 years 6 months ago
Hybridization of very large neighborhood search for ready-mixed concrete delivery problems
Companies in the concrete industry are facing the following scheduling problem on a daily basis: concrete produced at several plants has to be delivered at customers' constru...
Verena Schmid, Karl F. Doerner, Richard F. Hartl, ...
ICDE
2001
IEEE
201views Database» more  ICDE 2001»
16 years 7 months ago
Approximate Nearest Neighbor Searching in Multimedia Databases
In this paper, we develop a general framework for approximate nearest neighbor queries. We categorize the current approaches for nearest neighbor query processing based on either ...
Hakan Ferhatosmanoglu, Ertem Tuncel, Divyakant Agr...
BMCBI
2005
132views more  BMCBI 2005»
15 years 6 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer