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SDM
2012
SIAM
297views Data Mining» more  SDM 2012»
13 years 9 months ago
A Flexible Open-Source Toolbox for Scalable Complex Graph Analysis
The Knowledge Discovery Toolbox (KDT) enables domain experts to perform complex analyses of huge datasets on supercomputers using a high-level language without grappling with the ...
Adam Lugowski, David M. Alber, Aydin Buluç,...
BMCBI
2008
187views more  BMCBI 2008»
15 years 6 months ago
PSAT: A web tool to compare genomic neighborhoods of multiple prokaryotic genomes
Background: The conservation of gene order among prokaryotic genomes can provide valuable insight into gene function, protein interactions, or events by which genomes have evolved...
Christine Fong, Laurence Rohmer, Matthew Radey, Mi...
SODA
2012
ACM
212views Algorithms» more  SODA 2012»
13 years 9 months ago
Parallelism and time in hierarchical self-assembly
We study the role that parallelism plays in time complexariants of Winfree’s abstract Tile Assembly Model (aTAM), a model of molecular algorithmic self-assembly. In the “hiera...
Ho-Lin Chen, David Doty
SIGSOFT
2007
ACM
16 years 7 months ago
Programming asynchronous layers with CLARITY
Asynchronous systems components are hard to write, hard to reason about, and (not coincidentally) hard to mechanically verify. In order to achieve high performance, asynchronous c...
Prakash Chandrasekaran, Christopher L. Conway, Jos...
EUROSYS
2008
ACM
16 years 3 months ago
Documenting and automating collateral evolutions in linux device drivers
The internal libraries of Linux are evolving rapidly, to address new requirements and improve performance. These evolutions, however, entail a massive problem of collateral evolut...
Yoann Padioleau, Julia L. Lawall, René Rydh...