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» Multiple alignment by aligning alignments
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GLOBECOM
2007
IEEE
16 years 1 months ago
Degrees of Freedom of the MIMO X Channel
— We provide achievability as well as converse results for the degrees of freedom region of a MIMO X channel, i.e., a system with two transmitters, two receivers, each equipped w...
Syed Ali Jafar, Shlomo Shamai
IPPS
2007
IEEE
16 years 1 months ago
An Implementation and Evaluation of Client-Side File Caching for MPI-IO
Client-side file caching has long been recognized as a file system enhancement to reduce the amount of data transfer between application processes and I/O servers. However, cach...
Wei-keng Liao, Avery Ching, Kenin Coloma, Alok N. ...
CF
2007
ACM
15 years 10 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
BMCBI
2010
96views more  BMCBI 2010»
15 years 6 months ago
ModuleOrganizer: detecting modules in families of transposable elements
Background: Most known eukaryotic genomes contain mobile copied elements called transposable elements. In some species, these elements account for the majority of the genome seque...
Sébastien Tempel, Christine Rousseau, Fariz...
BMCBI
2007
99views more  BMCBI 2007»
15 years 6 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias