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JIB
2007
95views more  JIB 2007»
15 years 6 months ago
Mining for Single Nucleotide Polymorphisms in Expressed Sequence Tags
As a multitude of sequence data are published, discovering polymorphisms bioinformatically becomes a valid option. In silico Single Nucleotide Polymorphism (SNP) detection is base...
E. L. Souche, B. Hellemans, J. K. J. Van Houdt, A....
SEMWEB
2009
Springer
16 years 1 months ago
RiMOM Results for OAEI 2009
In this report, we give a brief explanation of how RiMOM obtains the results at OAEI 2009 Campaign, especially in the new Instance Matching track. At first, we show the basic alig...
Xiao Zhang, Qian Zhong, Feng Shi, Juanzi Li, Jie T...
IPPS
1998
IEEE
15 years 11 months ago
Randomization in Parallel Stringology
In this abstract, we provide an overview of our survey of randomized techniques for exploiting the parallelism in string matching problems. Broadly, the study of string matching fa...
S. Muthukrishnan
BMCBI
2010
133views more  BMCBI 2010»
15 years 6 months ago
Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
Lance E. Palmer, Mathäus Dejori, Randall A. B...
BMCBI
2010
145views more  BMCBI 2010»
15 years 6 months ago
JCoDA: a tool for detecting evolutionary selection
Background: The incorporation of annotated sequence information from multiple related species in commonly used databases (Ensembl, Flybase, Saccharomyces Genome Database, Wormbase...
Steven N. Steinway, Ruth Dannenfelser, Christopher...