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BIOCOMP
2008
15 years 8 months ago
Reverse Engineering Module Networks by PSO-RNN Hybrid Modeling
Background: Inferring a gene regulatory network (GRN) from high throughput biological data is often an under-determined problem and is a challenging task due to the following reas...
Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
TKDE
2008
218views more  TKDE 2008»
15 years 6 months ago
A General Model for Sequential Pattern Mining with a Progressive Database
Although there have been many recent studies on the mining of sequential patterns in a static database and in a database with increasing data, these works, in general, do not fully...
Jen-Wei Huang, Chi-Yao Tseng, Jian Chih Ou, Ming-S...
PROPERTYTESTING
2010
15 years 4 months ago
Sublinear Algorithms in the External Memory Model
We initiate the study of sublinear-time algorithms in the external memory model [Vit01]. In this model, the data is stored in blocks of a certain size B, and the algorithm is char...
Alexandr Andoni, Piotr Indyk, Krzysztof Onak, Roni...
GCB
2009
Springer
196views Biometrics» more  GCB 2009»
15 years 4 months ago
Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Developm
Abstract: A comparative interaction detection paradigm is proposed to study the complex gene regulatory networks that control cell proliferation during development. Instead of atte...
Mingzhou Song, Chung-Chien Hong, Yang Zhang, Laura...
ISBI
2004
IEEE
16 years 7 months ago
Probabilistic ICA for fMRI
Independent Component Analysis is becoming a popular exploratory method for analysing complex data such as that from FMRI experiments. The application of such `model-free' me...
Christian Beckmann