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ASPLOS
2010
ACM
15 years 11 months ago
An asymmetric distributed shared memory model for heterogeneous parallel systems
Heterogeneous computing combines general purpose CPUs with accelerators to efficiently execute both sequential control-intensive and data-parallel phases of applications. Existin...
Isaac Gelado, Javier Cabezas, Nacho Navarro, John ...
ICS
2001
Tsinghua U.
15 years 11 months ago
Global optimization techniques for automatic parallelization of hybrid applications
This paper presents a novel technique to perform global optimization of communication and preprocessing calls in the presence of array accesses with arbitrary subscripts. Our sche...
Dhruva R. Chakrabarti, Prithviraj Banerjee
172
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VLDB
2001
ACM
129views Database» more  VLDB 2001»
15 years 11 months ago
Similarity Search for Adaptive Ellipsoid Queries Using Spatial Transformation
Similarity retrieval mechanisms should utilize generalized quadratic form distance functions as well as the Euclidean distance function since ellipsoid queries parameters may vary...
Yasushi Sakurai, Masatoshi Yoshikawa, Ryoji Kataok...
BMCBI
2010
72views more  BMCBI 2010»
15 years 7 months ago
Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials
Background: Knowledge-based potentials have been widely used in the last 20 years for fold recognition, protein structure prediction from amino acid sequence, ligand binding, prot...
Yaping Feng, Andrzej Kloczkowski, Robert L. Jernig...
BMCBI
2010
127views more  BMCBI 2010»
15 years 7 months ago
Computational prediction of type III secreted proteins from gram-negative bacteria
Background: Type III secretion system (T3SS) is a specialized protein delivery system in gramnegative bacteria that injects proteins (called effectors) directly into the eukaryoti...
Yang Yang, Jiayuan Zhao, Robyn L. Morgan, Wenbo Ma...