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BMCBI
2010
136views more  BMCBI 2010»
15 years 6 months ago
A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles
Background: Many research results show that the biological systems are composed of functional modules. Members in the same module usually have common functions. This is useful inf...
Chia-Hao Chin, Shu-Hwa Chen, Chin-Wen Ho, Ming-Tat...
SC
1995
ACM
15 years 10 months ago
Parallel Matrix-Vector Product Using Approximate Hierarchical Methods
Matrix-vector products (mat-vecs) form the core of iterative methods used for solving dense linear systems. Often, these systems arise in the solution of integral equations used i...
Ananth Grama, Vipin Kumar, Ahmed H. Sameh
BMCBI
2004
158views more  BMCBI 2004»
15 years 6 months ago
A novel Mixture Model Method for identification of differentially expressed genes from DNA microarray data
Background: The main goal in analyzing microarray data is to determine the genes that are differentially expressed across two types of tissue samples or samples obtained under two...
Kayvan Najarian, Maryam Zaheri, Ali Ajdari Rad, Si...
KBSE
2007
IEEE
16 years 24 days ago
Improving evolutionary class testing in the presence of non-public methods
Automating the generation of object-oriented unit tests is a challenging task. This is mainly due to the complexity and peculiarities that the principles of object-orientation imp...
Stefan Wappler, Ina Schieferdecker
BMCBI
2008
138views more  BMCBI 2008»
15 years 6 months ago
Methods for simultaneously identifying coherent local clusters with smooth global patterns in gene expression profiles
Background: The hierarchical clustering tree (HCT) with a dendrogram [1] and the singular value decomposition (SVD) with a dimension-reduced representative map [2] are popular met...
Yin-Jing Tien, Yun-Shien Lee, Han-Ming Wu, Chun-Ho...