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BMCBI
2005
104views more  BMCBI 2005»
15 years 6 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
BMCBI
2005
100views more  BMCBI 2005»
15 years 6 months ago
Scoredist: A simple and robust protein sequence distance estimator
Background: Distance-based methods are popular for reconstructing evolutionary trees thanks to their speed and generality. A number of methods exist for estimating distances from ...
Erik L. L. Sonnhammer, Volker Hollich
JCB
2007
146views more  JCB 2007»
15 years 6 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
TMC
2008
192views more  TMC 2008»
15 years 6 months ago
A Bidding Algorithm for Optimized Utility-Based Resource Allocation in Ad Hoc Networks
Abstract-- This article proposes a scheme for bandwidth allocation in wireless ad hoc networks. The quality of service (QoS) levels for each end-to-end flow are expressed using a r...
Calin Curescu, Simin Nadjm-Tehrani
JCP
2007
118views more  JCP 2007»
15 years 6 months ago
Dynamic Nonuniform Data Approximation in Databases with Haar Wavelet
Abstract— Data synopsis is a lossy compressed representation of data stored into databases that helps the query optimizer to speed up the query process, e.g. time to retrieve the...
Su Chen, Antonio Nucci
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