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BIOCOMP
2007
15 years 7 months ago
Interaction Models for Biochemical Reactions
Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...
WOB
2008
101views Bioinformatics» more  WOB 2008»
15 years 7 months ago
Top-Down Hierarchical Ensembles of Classifiers for Predicting G-Protein-Coupled-Receptor Functions
Abstract. Despite the recent advances in Molecular Biology, the function of a large amount of proteins is still unknown. An approach that can be used in the prediction of a protein...
Eduardo P. Costa, Ana Carolina Lorena, André...
TREC
2004
15 years 7 months ago
Identifying Relevant Full-Text Articles for GO Annotation Without MeSH Terms
Gene Ontology (GO) is a controlled vocabulary. Given a gene product, GO enables scientists to clearly and unambiguously describe specific molecular functions of the gene product, ...
Chih Lee, Wen-Juan Hou, Hsin-Hsi Chen
WOB
2004
15 years 7 months ago
A Multi-Neighbor-Joining Approach for Phylogenetic Tree Reconstruction and Visualization
ABSTRACT. The computationally challenging problem of reconstructing the phylogeny of a set of contemporary data, such as DNA sequences or morphological attributes, was treated by a...
Ana Estela Antunes da Silva, Wilfredo J. Puma-Vill...
WOB
2004
120views Bioinformatics» more  WOB 2004»
15 years 7 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...