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CORR
2010
Springer
160views Education» more  CORR 2010»
15 years 7 months ago
Scalable Probabilistic Databases with Factor Graphs and MCMC
Incorporating probabilities into the semantics of incomplete databases has posed many challenges, forcing systems to sacrifice modeling power, scalability, or treatment of relatio...
Michael L. Wick, Andrew McCallum, Gerome Miklau
DC
2008
15 years 7 months ago
Fast computation by population protocols with a leader
Fast algorithms are presented for performing computations in a probabilistic population model. This is a variant of the standard population protocol model--in which finite-state ag...
Dana Angluin, James Aspnes, David Eisenstat
BMCBI
2006
120views more  BMCBI 2006»
15 years 7 months ago
Integrating protein structures and precomputed genealogies in the Magnum database: Examples with cellular retinoid binding prote
Background: When accurate models for the divergent evolution of protein sequences are integrated with complementary biological information, such as folded protein structures, anal...
Michael E. Bradley, Steven A. Benner
BMCBI
2006
195views more  BMCBI 2006»
15 years 7 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
BMCBI
2006
130views more  BMCBI 2006»
15 years 7 months ago
Docking protein domains in contact space
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
Stefano Lise, Alice Walker-Taylor, David T. Jones
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