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BMCBI
2007
157views more  BMCBI 2007»
15 years 6 months ago
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational
Background: High-throughput peptide and protein identification technologies have benefited tremendously from strategies based on tandem mass spectrometry (MS/MS) in combination wi...
Nico Pfeifer, Andreas Leinenbach, Christian G. Hub...
141
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WSC
2004
15 years 7 months ago
On-Demand Computation of Policy Based Routes for Large-Scale Network Simulation
Routing table storage demands pose a significant obstacle for large-scale network simulation. On-demand computation of routes can alleviate those problems for models that do not r...
Michael Liljenstam, David M. Nicol
IPPS
1998
IEEE
15 years 10 months ago
Benchmarking the Task Graph Scheduling Algorithms
The problem of scheduling a weighted directed acyclic graph (DAG) to a set of homogeneous processors to minimize the completion time has been extensively studied. The NPcompletene...
Yu-Kwong Kwok, Ishfaq Ahmad
CSC
2010
15 years 1 months ago
Performance Modeling, Analysis, and Optimization of Cell-List Based Molecular Dynamics
- We have developed a performance prediction model for non-bonded interaction computations in molecular dynamics simulations, thereby predicting the optimal cell dimension in a lin...
Manaschai Kunaseth, Rajiv K. Kalia, Aiichiro Nakan...
RECOMB
2009
Springer
16 years 6 months ago
Searching Protein 3-D Structures in Linear Time
Finding similar structures from 3-D structure databases of proteins is becoming more and more important issue in the post-genomic molecular biology. To compare 3-D structures of tw...
Tetsuo Shibuya