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BMCBI
2007
102views more  BMCBI 2007»
15 years 6 months ago
Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties
Background: Homology is a key concept in both evolutionary biology and genomics. Detection of homology is crucial in fields like the functional annotation of protein sequences and...
Jos Boekhorst, Berend Snel
BMCBI
2006
166views more  BMCBI 2006»
15 years 6 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
BMCBI
2005
93views more  BMCBI 2005»
15 years 6 months ago
SPdb - a signal peptide database
Background: The signal peptide plays an important role in protein targeting and protein translocation in both prokaryotic and eukaryotic cells. This transient, short peptide seque...
Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan
GIS
2010
ACM
15 years 5 months ago
Automatic construction and multi-level visualization of semantic trajectories
With the prevalence of GPS-embedded mobile devices, enormous amounts of mobility data are being collected in the form of trajectory - a stream of (x,y,t) points. Such trajectories...
Zhixian Yan, Lazar Spremic, Dipanjan Chakraborty, ...
SIGMOD
2012
ACM
234views Database» more  SIGMOD 2012»
13 years 8 months ago
Oracle in-database hadoop: when mapreduce meets RDBMS
Big data is the tar sands of the data world: vast reserves of raw gritty data whose valuable information content can only be extracted at great cost. MapReduce is a popular parall...
Xueyuan Su, Garret Swart