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IPPS
2009
IEEE
16 years 29 days ago
Long time-scale simulations of in vivo diffusion using GPU hardware
To address the problem of performing long time simulations of biochemical pathways under in vivo cellular conditions, we have developed a lattice-based, reaction-diffusion model t...
Elijah Roberts, John E. Stone, Leonardo Sepulveda,...
BIBM
2008
IEEE
142views Bioinformatics» more  BIBM 2008»
16 years 24 days ago
Using Global Sequence Similarity to Enhance Biological Sequence Labeling
Identifying functionally important sites from biological sequences, formulated as a biological sequence labeling problem, has broad applications ranging from rational drug design ...
Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasa...
DATE
2008
IEEE
111views Hardware» more  DATE 2008»
16 years 24 days ago
A Formal Approach To The Protocol Converter Problem
In the absence of a single module interface standard, integration of pre-designed modules in System-on-Chip design often requires the use of protocol converters. Existing approach...
Karin Avnit, Vijay D'Silva, Arcot Sowmya, S. Rames...
P2P
2007
IEEE
165views Communications» more  P2P 2007»
16 years 18 days ago
An Information-Theoretic Framework for Analyzing Leak of Privacy in Distributed Hash Tables
An important security issue in DHT-based structured overlay networks is to provide anonymity to the storage nodes. Compromised routing tables in those DHTs leak information about ...
Souvik Ray, Zhao Zhang
AOSE
2007
Springer
16 years 15 days ago
A Goal-Oriented Software Testing Methodology
Abstract. Agent-Oriented Software Engineering (AOSE) methodologies are proposed to develop complex distributed systems based upon the agent paradigm. The natural implementation for...
Duy Cu Nguyen, Anna Perini, Paolo Tonella