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ICML
2004
IEEE
16 years 7 months ago
Dynamic conditional random fields: factorized probabilistic models for labeling and segmenting sequence data
In sequence modeling, we often wish to represent complex interaction between labels, such as when performing multiple, cascaded labeling tasks on the same sequence, or when longra...
Charles A. Sutton, Khashayar Rohanimanesh, Andrew ...
RECOMB
2003
Springer
16 years 6 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...
CVPR
2006
IEEE
16 years 8 months ago
Context and Hierarchy in a Probabilistic Image Model
It is widely conjectured that the excellent ROC performance of biological vision systems is due in large part to the exploitation of context at each of many levels in a part/whole...
Ya Jin, Stuart Geman
ACL
2010
15 years 4 months ago
Phrase-Based Statistical Language Generation Using Graphical Models and Active Learning
Most previous work on trainable language generation has focused on two paradigms: (a) using a statistical model to rank a set of generated utterances, or (b) using statistics to i...
François Mairesse, Milica Gasic, Filip Jurc...
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
16 years 19 days ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...