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BMCBI
2008
122views more  BMCBI 2008»
15 years 6 months ago
High-throughput bioinformatics with the Cyrille2 pipeline system
Background: Modern omics research involves the application of high-throughput technologies that generate vast volumes of data. These data need to be pre-processed, analyzed and in...
Mark W. E. J. Fiers, Ate van der Burgt, Erwin Date...
BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
15 years 6 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
CONSTRAINTS
2011
15 years 1 months ago
Dantzig-Wolfe decomposition and branch-and-price solving in G12
Abstract The G12 project is developing a software environment for stating and solving combinatorial problems by mapping a high-level model of the problem to an efficient combinatio...
Jakob Puchinger, Peter J. Stuckey, Mark G. Wallace...
OOPSLA
2007
Springer
16 years 12 days ago
IAnticorruption: a domain-driven design approach to more robust integration
Custom House's new currency exchange system is integrated with a legacy system. After a few years of growth, the two systems were so intricately tangled that even small chang...
Sam Peng, Ying Hu
FMCAD
2009
Springer
15 years 10 months ago
Industrial strength refinement checking
This paper discusses a methodology used on an industrial hardware development project to validate various cache-coherence protocol components. The idea is to use a high level model...
Jesse D. Bingham, John Erickson, Gaurav Singh, Fle...