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RECOMB
2004
Springer
16 years 6 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
PERCOM
2007
ACM
16 years 5 months ago
Mining Frequent Trajectory Patterns for Activity Monitoring Using Radio Frequency Tag Arrays
Activity monitoring, a crucial task in many applications, is often conducted expensively using video cameras. Also, effectively monitoring a large field by analyzing images from m...
Yunhao Liu, Lei Chen 0002, Jian Pei, Qiuxia Chen, ...
SDM
2010
SIAM
115views Data Mining» more  SDM 2010»
15 years 7 months ago
Radius Plots for Mining Tera-byte Scale Graphs: Algorithms, Patterns, and Observations
Given large, multi-million node graphs (e.g., FaceBook, web-crawls, etc.), how do they evolve over time? How are they connected? What are the central nodes and the outliers of the...
U. Kang, Charalampos E. Tsourakakis, Ana Paula App...
SIGSOFT
2007
ACM
16 years 7 months ago
Mining API patterns as partial orders from source code: from usage scenarios to specifications
A software system interacts with third-party libraries through various APIs. Using these library APIs often needs to follow certain usage patterns. Furthermore, ordering rules (sp...
Mithun Acharya, Tao Xie, Jian Pei, Jun Xu
BMCBI
2008
123views more  BMCBI 2008»
15 years 6 months ago
Functional module detection by functional flow pattern mining in protein interaction networks
eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
Young-Rae Cho, Lei Shi, Aidong Zhang