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BMCBI
2008
94views more  BMCBI 2008»
15 years 6 months ago
A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods
Background: The Golden Spike data set has been used to validate a number of methods for summarizing Affymetrix data sets, sometimes with seemingly contradictory results. Much less...
Richard D. Pearson
BMCBI
2005
122views more  BMCBI 2005»
15 years 6 months ago
GenClust: A genetic algorithm for clustering gene expression data
Background: Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designe...
Vito Di Gesù, Raffaele Giancarlo, Giosu&egr...
DATAMINE
2006
130views more  DATAMINE 2006»
15 years 6 months ago
Mining Adaptive Ratio Rules from Distributed Data Sources
Different from traditional association-rule mining, a new paradigm called Ratio Rule (RR) was proposed recently. Ratio rules are aimed at capturing the quantitative association kno...
Jun Yan, Ning Liu, Qiang Yang, Benyu Zhang, QianSh...
BMCBI
2005
98views more  BMCBI 2005»
15 years 6 months ago
The effects of normalization on the correlation structure of microarray data
Background: Stochastic dependence between gene expression levels in microarray data is of critical importance for the methods of statistical inference that resort to pooling test-...
Xing Qiu, Andrew I. Brooks, Lev Klebanov, Andrei Y...
BMCBI
2006
150views more  BMCBI 2006»
15 years 6 months ago
Instance-based concept learning from multiclass DNA microarray data
Background: Various statistical and machine learning methods have been successfully applied to the classification of DNA microarray data. Simple instance-based classifiers such as...
Daniel P. Berrar, Ian Bradbury, Werner Dubitzky