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NAR
2010
184views more  NAR 2010»
15 years 1 months ago
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes
The RegPrecise database (http://regprecise.lbl.gov) was developed for capturing, visualization and analysis of predicted transcription factor regulons in prokaryotes that were rec...
Pavel S. Novichkov, Olga N. Laikova, Elena S. Novi...
FODO
1998
Springer
242views Algorithms» more  FODO 1998»
15 years 11 months ago
Optimizing OID Indexing Cost in Temporal Object-Oriented Database Systems
In object-oriented database systems (OODB) with logical OIDs, an OID index (OIDX) is needed to map from OID to the physical location of the object. In a transaction time temporal ...
Kjetil Nørvåg, Kjell Bratbergsengen
ESWS
2010
Springer
15 years 8 months ago
An Unsupervised Approach for Acquiring Ontologies and RDF Data from Online Life Science Databases
In the Linked Open Data cloud one of the largest data sets, comprising of 2.5 billion triples, is derived from the Life Science domain. Yet this represents a small fraction of the ...
Saqib Mir, Steffen Staab, Isabel Rojas
BMCBI
2007
91views more  BMCBI 2007»
15 years 6 months ago
A mass accuracy sensitive probability based scoring algorithm for database searching of tandem mass spectrometry data
Background: Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) has become one of the most used tools in mass spectrometry based proteomics. Various algorithms ...
Hua Xu, Michael A. Freitas
BMCBI
2006
120views more  BMCBI 2006»
15 years 6 months ago
SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces
Background: Currently there is a strong need for methods that help to obtain an accurate description of protein interfaces in order to be able to understand the principles that go...
Joan Teyra, Andreas Doms, Michael Schroeder, M. Te...