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BMCBI
2006
130views more  BMCBI 2006»
15 years 6 months ago
CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
Background: The incorporation of statistical models that account for experimental variability provides a necessary framework for the interpretation of microarray data. A robust ex...
Kevin A. Greer, Matthew R. McReynolds, Heddwen L. ...
BMCBI
2006
136views more  BMCBI 2006»
15 years 6 months ago
Metric for Measuring the Effectiveness of Clustering of DNA Microarray Expression
Background: The recent advancement of microarray technology with lower noise and better affordability makes it possible to determine expression of several thousand genes simultane...
Raja Loganantharaj, Satish Cheepala, John Clifford
BMCBI
2006
117views more  BMCBI 2006»
15 years 6 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
SIGMETRICS
2008
ACM
128views Hardware» more  SIGMETRICS 2008»
15 years 6 months ago
Confident estimation for multistage measurement sampling and aggregation
Measurement, collection, and interpretation of network usage data commonly involves multiple stage of sampling and aggregation. Examples include sampling packets, aggregating them...
Edith Cohen, Nick G. Duffield, Carsten Lund, Mikke...
BMCBI
2004
114views more  BMCBI 2004»
15 years 6 months ago
Extending the mutual information measure to rank inferred literature relationships
Background: Within the peer-reviewed literature, associations between two things are not always recognized until commonalities between them become apparent. These commonalities ca...
Jonathan D. Wren