A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...
Object-oriented languages such as Java, Smalltalk, and C++ structure their programs using packages, allowing classes to be organized into named abstractions. Maintainers of large ...
This paper presents an open contour tracking method that employs an arc-emission Hidden Markov Model (HMM). The algorithm encodes the shape information of the structure in a spati...
Mehmet Emre Sargin, Alphan Altinok, Kenneth Rose, ...
We revisit the problem of memory checking considered by Blum et al. [3]. In this model, a checker monitors the behavior of a data structure residing in unreliable memory given an a...