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RECOMB
2001
Springer
16 years 7 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
GCB
2009
Springer
180views Biometrics» more  GCB 2009»
16 years 1 months ago
2D Projections of RNA Folding Landscapes
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...
Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker
CSMR
2008
IEEE
16 years 1 months ago
Package Reference Fingerprint: a Rich and Compact Visualization to Understand Package Relationships
Object-oriented languages such as Java, Smalltalk, and C++ structure their programs using packages, allowing classes to be organized into named abstractions. Maintainers of large ...
Hani Abdeen, Ilham Alloui, Stéphane Ducasse...
ICASSP
2008
IEEE
16 years 1 months ago
Deformable trellis: open contour tracking in bio-image sequences
This paper presents an open contour tracking method that employs an arc-emission Hidden Markov Model (HMM). The algorithm encodes the shape information of the structure in a spati...
Mehmet Emre Sargin, Alphan Altinok, Kenneth Rose, ...
ICALP
2007
Springer
16 years 26 days ago
Checking and Spot-Checking the Correctness of Priority Queues
We revisit the problem of memory checking considered by Blum et al. [3]. In this model, a checker monitors the behavior of a data structure residing in unreliable memory given an a...
Matthew Chu, Sampath Kannan, Andrew McGregor