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ENTCS
2007
107views more  ENTCS 2007»
15 years 7 months ago
Event Domains, Stable Functions and Proof-Nets
We pursue the program of exposing the intrinsic mathematical structure of the “space of proofs” of a logical system [AJ94b]. We study the case of Multiplicative-Additive Linea...
Samson Abramsky
BMCBI
2005
92views more  BMCBI 2005»
15 years 7 months ago
A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles
Background: We have developed the program PERMOL for semi-automated homology modeling of proteins. It is based on restrained molecular dynamics using a simulated annealing protoco...
Andreas Möglich, Daniel Weinfurtner, Till Mau...
JCB
2000
129views more  JCB 2000»
15 years 6 months ago
Prediction of RNA Base Pairing Probabilities on Massively Parallel Computers
We present an implementation of McCaskill's algorithm for computing the base pair probabilities of an RNA molecule for massively parallel message passing architectures. The p...
Martin Fekete, Ivo L. Hofacker, Peter F. Stadler
VMCAI
2004
Springer
16 years 11 days ago
Boolean Algebra of Shape Analysis Constraints
Shape analysis is a promising technique for statically verifying and extracting properties of programs that manipulate complex data structures. We introduce a new characterization...
Viktor Kuncak, Martin C. Rinard
ICALP
2010
Springer
15 years 11 months ago
Mergeable Dictionaries
A data structure is presented for the Mergeable Dictionary abstract data type, which supports the following operations on a collection of disjoint sets of totally ordered data: Pr...
John Iacono, Özgür Özkan