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POPL
2005
ACM
16 years 7 months ago
Environmental acquisition revisited
In 1996, Gil and Lorenz proposed programming language constructs for specifying environmental acquisition in addition to inheritance acquisition for objects. They noticed that in ...
Richard Cobbe, Matthias Felleisen
RECOMB
2008
Springer
16 years 7 months ago
Automatic Recognition of Cells (ARC) for 3D Images of C. elegans
The development of high-resolution microscopy makes possible the high-throughput screening of cellular information, such as gene expression at single cell resolution. One of the cr...
Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim...
RECOMB
2006
Springer
16 years 7 months ago
Leveraging Information Across HLA Alleles/Supertypes Improves Epitope Prediction
We present a model for predicting HLA class I restricted CTL epitopes. In contrast to almost all other work in this area, we train a single model on epitopes from all HLA alleles a...
David Heckerman, Carl Myers Kadie, Jennifer Listga...
RECOMB
2005
Springer
16 years 7 months ago
Consensus Folding of Unaligned RNA Sequences Revisited
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
Vineet Bafna, Haixu Tang, Shaojie Zhang
RECOMB
2003
Springer
16 years 7 months ago
Modeling dependencies in protein-DNA binding sites
The availability of whole genome sequences and high-throughput genomic assays opens the door for in silico analysis of transcription regulation. This includes methods for discover...
Yoseph Barash, Gal Elidan, Nir Friedman, Tommy Kap...