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186
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BMCBI
2007
162views more  BMCBI 2007»
15 years 7 months ago
Bioclipse: an open source workbench for chemo- and bioinformatics
Background: There is a need for software applications that provide users with a complete and extensible toolkit for chemo- and bioinformatics accessible from a single workbench. C...
Ola Spjuth, Tobias Helmus, Egon L. Willighagen, St...
181
Voted
BMCBI
2008
188views more  BMCBI 2008»
15 years 7 months ago
anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data
Background: Compared to other omics techniques, quantitative metabolomics is still at its infancy. Complex sample preparation and analytical procedures render exact quantification...
Nicola Zamboni, Anne Kümmel, Matthias Heinema...
209
Voted
BMCBI
2008
83views more  BMCBI 2008»
15 years 7 months ago
Terminologies for text-mining; an experiment in the lipoprotein metabolism domain
Background: The engineering of ontologies, especially with a view to a text-mining use, is still a new research field. There does not yet exist a well-defined theory and technolog...
Dimitra Alexopoulou, Thomas Wächter, Laura Pi...
221
Voted
BMCBI
2008
122views more  BMCBI 2008»
15 years 7 months ago
Reconstructing networks of pathways via significance analysis of their intersections
Background: Significance analysis at single gene level may suffer from the limited number of samples and experimental noise that can severely limit the power of the chosen statist...
Mirko Francesconi, Daniel Remondini, Nicola Nerett...
CCR
2010
179views more  CCR 2010»
15 years 7 months ago
An argument for increasing TCP's initial congestion window
TCP flows start with an initial congestion window of at most four segments or approximately 4KB of data. Because most Web transactions are short-lived, the initial congestion wind...
Nandita Dukkipati, Tiziana Refice, Yuchung Cheng, ...
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