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IPPS
2003
IEEE
15 years 11 months ago
Sequence Alignment on the Cray MTA-2
The standard algorithm for alignment of DNA sequences using dynamic programming has been implemented on the Cray MTA-2 (Multithreaded Architecture-2) at ENRI (Electronic Navigatio...
Shahid H. Bokhari, Jon R. Sauer
WOMPAT
2004
Springer
15 years 11 months ago
Dragon: A Static and Dynamic Tool for OpenMP
A program analysis tool can play an important role in helping users understand and improve OpenMP codes. Dragon is a robust interactive program analysis tool based on the Open64 co...
Oscar Hernandez, Chunhua Liao, Barbara M. Chapman
CONCURRENCY
1998
139views more  CONCURRENCY 1998»
15 years 5 months ago
Applications experience in Jade
This paper presents our experience developing applications in Jade, a portable, implicitly parallel programming language designed for exploiting task-level concurrency. Jade progr...
Martin C. Rinard
SC
2000
ACM
15 years 10 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
IPPS
2009
IEEE
16 years 16 days ago
Work-first and help-first scheduling policies for async-finish task parallelism
Multiple programming models are emerging to address an increased need for dynamic task parallelism in applications for multicore processors and shared-address-space parallel compu...
Yi Guo, Rajkishore Barik, Raghavan Raman, Vivek Sa...