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BMCBI
2008
129views more  BMCBI 2008»
15 years 6 months ago
Gene set enrichment analysis for non-monotone association and multiple experimental categories
Background: Recently, microarray data analyses using functional pathway information, e.g., gene set enrichment analysis (GSEA) and significance analysis of function and expression...
Rongheng Lin, Shuangshuang Dai, Richard D. Irwin, ...
BMCBI
2004
139views more  BMCBI 2004»
15 years 6 months ago
Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels an
Background: The detection of small yet statistically significant differences in gene expression in spotted DNA microarray studies is an ongoing challenge. Meeting this challenge r...
Jeffrey P. Townsend
BMCBI
2011
15 years 25 days ago
SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects
Background: High-throughput re-sequencing, new genotyping technologies and the availability of reference genomes allow the extensive characterization of Single Nucleotide Polymorp...
Alexis Dereeper, Stéphane Nicolas, Loic Le ...
SIGMOD
2012
ACM
220views Database» more  SIGMOD 2012»
13 years 8 months ago
GUPT: privacy preserving data analysis made easy
It is often highly valuable for organizations to have their data analyzed by external agents. However, any program that computes on potentially sensitive data risks leaking inform...
Prashanth Mohan, Abhradeep Thakurta, Elaine Shi, D...
BMCBI
2010
124views more  BMCBI 2010»
15 years 6 months ago
GPFrontend and GPGraphics: graphical analysis tools for genetic association studies
Background: Most software packages for whole genome association studies are non-graphical, purely text based programs originally designed to run with UNIX-like operating systems. ...
Steffen Uebe, Francesca Pasutto, Mandy Krumbiegel,...