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BMCBI
2006
129views more  BMCBI 2006»
15 years 6 months ago
A literature-based similarity metric for biological processes
Background: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-...
Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, J...
IJWBC
2007
90views more  IJWBC 2007»
15 years 6 months ago
Salutogenic community building
This paper explores a new approach to community building. It is based on the concept of salutogenesis; a proactive approach to community health which seeks preventative measures i...
Khamphira Viravong
BMCBI
2004
150views more  BMCBI 2004»
15 years 6 months ago
Graph-based iterative Group Analysis enhances microarray interpretation
Background: One of the most time-consuming tasks after performing a gene expression experiment is the biological interpretation of the results by identifying physiologically impor...
Rainer Breitling, Anna Amtmann, Pawel Herzyk
BMCBI
2004
143views more  BMCBI 2004»
15 years 6 months ago
Comparing functional annotation analyses with Catmap
Background: Ranked gene lists from microarray experiments are usually analysed by assigning significance to predefined gene categories, e.g., based on functional annotations. Tool...
Thomas Breslin, Patrik Edén, Morten Krogh
KCAP
2011
ACM
14 years 9 months ago
Let's agree to disagree: on the evaluation of vocabulary alignment
Gold standard mappings created by experts are at the core of alignment evaluation. At the same time, the process of manual evaluation is rarely discussed. While the practice of ha...
Anna Tordai, Jacco van Ossenbruggen, Guus Schreibe...