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BIOINFORMATICS
2010
94views more  BIOINFORMATICS 2010»
15 years 6 months ago
Globally, unrelated protein sequences appear random
Motivation: To test whether protein folding constraints and secondary structure sequence preferences significantly reduce the space of amino acid words in proteins, we compared th...
Daniel T. Lavelle, William R. Pearson
BMCBI
2010
124views more  BMCBI 2010»
15 years 6 months ago
A Dynamic Noise Level Algorithm for Spectral Screening of Peptide MS/MS Spectra
Background: High-throughput shotgun proteomics data contain a significant number of spectra from non-peptide ions or spectra of too poor quality to obtain highly confident peptide...
Hua Xu, Michael A. Freitas
BMCBI
2008
154views more  BMCBI 2008»
15 years 6 months ago
Sequence based residue depth prediction using evolutionary information and predicted secondary structure
Background: Residue depth allows determining how deeply a given residue is buried, in contrast to the solvent accessibility that differentiates between buried and solvent-exposed ...
Hua Zhang, Tuo Zhang, Ke Chen 0003, Shiyi Shen, Ji...
COR
2010
155views more  COR 2010»
15 years 6 months ago
A memetic algorithm for the multi-compartment vehicle routing problem with stochastic demands
The Multi-Compartment Vehicle Routing Problem (MC-VRP) consists of designing transportation routes to satisfy the demands of a set of costumers for several products that because o...
Jorge E. Mendoza, Bruno Castanier, Christelle Gu&e...
COR
2010
116views more  COR 2010»
15 years 6 months ago
The multi-shift vehicle routing problem with overtime
: In this paper, we study a new variant of the vehicle routing problem (VRP) with time windows, multi-shift, and overtime. In this problem, a limited fleet of vehicles is used repe...
Yingtao Ren, Maged M. Dessouky, Fernando Ord&oacut...